Portable microcomputer software for nucleotide sequence analysis
نویسندگان
چکیده
منابع مشابه
Portable microcomputer software for nucleotide sequence analysis.
The most common types of nucleotide sequence data analyses and handling can be done more conveniently and inexpensively on microcomputers than on large time-sharing systems. We present a package of computer programs for the analysis of DNA and RNA sequence data which overcomes many of the limitations imposed by microcomputers, while offering most of the features of programs commonly available o...
متن کاملSeqCalc: A portable bioinformatics software for sequence analysis
UNLABELLED Rapid genome sequencing enriched biological databases with enormous sequence data. Yet it remains a daunting task to unravel this information. However experimental and computational researchers lead their own way in analyzing sequence information. Here we introduce a standalone portable tool named "SeqCalc" that would assist the research personnel in computational sequence analysis a...
متن کاملDeterminants of the Demand for Microcomputer Software: An Econometric Analysis
As an economic good, software has a number of interesting properlies. k is relatively expensive to develop but can be almost costless to manufacture. Furthermore, the control of standards may be as critical in the software market as the intrinsic quality of the product. This is because a consumer who purchases a product adhering to industry standards is the beneficiary of a number of positive n...
متن کاملThe khmer software package: enabling efficient nucleotide sequence analysis
The khmer package is a freely available software library for working efficiently with fixed length DNA words, or k-mers. khmer provides implementations of a probabilistic k-mer counting data structure, a compressible De Bruijn graph representation, De Bruijn graph partitioning, and digital normalization. khmer is implemented in C++ and Python, and is freely available under the BSD license at h...
متن کاملStructure-independent nucleotide sequence analysis.
Substitution of inosine for granosine in the nucleic acid fragments synthesized for the sequencing of RNA effectively prevents the formation of secondary structures during electrophoretic analysis. Consequently, the mobility of each fragment in the sequencing gel is a strict function of its molecular weight. Inosine substitution should markedly improve the resolution that can be obtained in the...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Nucleic Acids Research
سال: 1982
ISSN: 0305-1048,1362-4962
DOI: 10.1093/nar/10.20.6451